STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115483829Uncharacterized protein LOC115483829 isoform X1. (1500 aa)    
Predicted Functional Partners:
NCAPG
Condensin complex subunit 3.
      
 0.605
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 
 0.564
LCORL
Ligand-dependent nuclear receptor corepressor-like protein isoform X3.
 
      0.538
GHSR
Growth hormone secretagogue receptor type 1 isoform X1.
      
 0.528
CDX1
Homeobox protein CDX1/4.
      
 0.527
IGFBP7
LOW QUALITY PROTEIN: insulin-like growth factor-binding protein 7.
      
 0.515
TCF7
Transcription factor 7.
      
 0.470
EZH1
[histone H3]-lysine27 N-trimethyltransferase EZH1.
   
 
 0.446
PLAG1
Zinc finger protein PLAG1 isoform X1.
    
 
 0.442
EGF
Pro-epidermal growth factor isoform X1.
      
 0.440
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.