Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001790annotation not available (102 aa)    
Predicted Functional Partners:
LPIN1
Phosphatidate phosphatase LPIN1 isoform X1.
    
  0.720
CDK1
Cyclin-dependent kinase 1.
    
 0.631
UBLCP1
Ubiquitin-like domain-containing CTD phosphatase 1.
    
 0.578
CCNB2
G2/mitotic-specific cyclin-B2.
     
 0.538
ENSSCAP00000002009
annotation not available
    
 0.523
CTDSPL
CTD small phosphatase like.
    
 0.523
CTDSPL2
CTD small phosphatase-like protein 2.
    
 0.523
CTDSP1
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1.
    
 0.523
ENSSCAP00000000624
annotation not available
    
 0.499
CDK3
Cyclin-dependent kinase 3.
    
 0.499
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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