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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001790annotation not available (102 aa)    
Predicted Functional Partners:
LPIN1
Phosphatidate phosphatase LPIN1 isoform X1.
  
 
 
0.564
UBLCP1
Ubiquitin-like domain-containing CTD phosphatase 1.
    
 0.541
ENSSCAP00000002009
annotation not available
    
 0.523
CTDSPL
CTD small phosphatase like.
    
 0.523
CTDSPL2
CTD small phosphatase-like protein 2.
    
 0.523
CTDSP1
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1.
    
 0.523
SOAT1
Sterol O-acyltransferase 1 isoform X2.
    
 0.462
CHKA
Choline kinase alpha isoform X3.
     
 0.437
ENSSCAP00000000624
annotation not available
    
 0.417
CDK3
Cyclin-dependent kinase 3.
    
 0.417
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.