STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001795annotation not available (2595 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.702
USH1C
USH1 protein network component harmonin.
   
 0.648
USH1G
Usher syndrome type-1G protein isoform X1.
   
 0.628
ANKS4B
LOW QUALITY PROTEIN: ankyrin repeat and SAM domain-containing protein 4B.
   
 0.620
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.505
RDX
Radixin isoform X1.
    
 0.499
EPS8
Epidermal growth factor receptor kinase substrate 8 isoform X1.
    
 0.471
EPS8L2
Epidermal growth factor receptor kinase substrate 8-like protein 2 isoform X2.
    
 0.471
LOC103816470
Protein fantom.
     
 0.467
PCDH15
Protocadherin related 15.
   
 0.447
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.