STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIKESHIProtein Hikeshi isoform X1. (197 aa)    
Predicted Functional Partners:
IPO13
Importin-13 isoform X1.
      
 0.750
HSPA13
Stress 70 protein chaperone microsome-associated 60kDa protein.
   
 0.702
HSPA2
Heat shock-related 70 kDa protein 2.
   
 0.685
HSPA8
Heat shock cognate 71 kDa protein.
   
 0.685
IPO5
Importin-5.
      
 0.682
HSPA4
Heat shock 70 kDa protein 4.
   
 0.673
NUP155
Nuclear pore complex protein Nup155.
     
 0.668
HSPA14
LOW QUALITY PROTEIN: heat shock 70 kDa protein 14.
   
 0.662
HSPA9
Stress-70 protein, mitochondrial isoform X2.
   
 0.650
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.645
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.