STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001816annotation not available (126 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.685
ENSSCAP00000008401
annotation not available
  
 0.682
ENSSCAP00000008417
annotation not available
  
 0.674
LOC103813338
Histone H2A-IV.
  
 0.670
LOC103813338-2
Histone H2A-IV.
  
 0.670
LOC115485216
Histone H2A-like.
  
 0.669
LOC103813361
Histone H2A.
  
 0.669
LOC103813346
Histone H2A.J.
  
 0.667
ENSSCAP00000023967
Histone H2A.
  
 0.667
LOC103812638
Histone H2A-beta, sperm-like.
  
 0.656
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.