Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD33Photoreceptor ankyrin repeat protein. (280 aa)    
Predicted Functional Partners:
SLC16A12
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 12.
    
 
 0.529
LIN7C
Protein lin-7 homolog C.
    
 0.484
LIN7A
Protein lin-7 homolog A isoform X2.
    
 0.484
MPDZ
Multiple PDZ domain protein isoform X12.
   
 0.478
LNX2
Ligand of Numb protein X 1/2.
   
 0.478
PATJ
InaD-like protein isoform X1.
   
 0.478
LNX1
Ligand of numb-protein X 1.
   
 0.478
LOC103816332
Ligand of Numb protein X 2-like.
   
 0.478
PARD3B
Par-3 family cell polarity regulator beta.
   
 0.474
RNF126
E3 ubiquitin-protein ligase RNF115/126.
    
 
 0.474
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.