STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001829annotation not available (1048 aa)    
Predicted Functional Partners:
ENSSCAP00000020550
Nucleoporin-like protein 2.
    
 0.942
RAE1
MRNA export factor.
   
 0.916
NUP205
Nuclear pore complex protein Nup205.
    
 0.900
NUP155
Nuclear pore complex protein Nup155.
   
 0.892
NUP107
Nuclear pore complex protein Nup107.
   
 0.882
NUP133
Nuclear pore complex protein Nup133.
   
 0.880
NUP85
Nuclear pore complex protein Nup85.
   
 0.878
NUP54
Nuclear pore complex protein Nup54.
   
 0.876
NUP93
Nuclear pore complex protein Nup93 isoform X3.
   
 0.857
RANBP2
RAN binding protein 2.
    
 0.855
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.