STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP1RNA polymerase II-associated protein 1 isoform X1. (1434 aa)    
Predicted Functional Partners:
GPN2
GPN-loop GTPase 2.
    
 
 0.987
GPN1
GPN-loop GTPase 1.
    
 
 0.977
POLR2M
RNA polymerase II subunit M.
    
 
 0.939
POLR2L
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 
 0.918
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 
 0.842
POLR2J
DNA-directed RNA polymerase II subunit RPB11-a.
    
 
 0.839
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
   
 
 0.705
RPAP2
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1.
      
 0.694
RPAP3
RNA polymerase II-associated protein 3 isoform X1.
      
 0.686
GPN3
GPN-loop GTPase 3.
      
 0.610
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.