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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIKFYVE1-phosphatidylinositol 3-phosphate 5-kinase isoform X2. (2162 aa)    
Predicted Functional Partners:
FIG4
Phosphatidylinositol 3,5-bisphosphate 5-phosphatase.
    
 0.999
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
  
  
 0.990
VAC14
Vacuole morphology and inheritance protein 14.
    
 0.983
PI4KB
LOW QUALITY PROTEIN: phosphatidylinositol 4-kinase beta.
     
 0.952
PI4KA
Phosphatidylinositol 4-kinase alpha isoform X1.
     
 0.951
DIPK2A
Divergent protein kinase domain 2A.
    
 0.947
PI4K2B
Phosphatidylinositol 4-kinase type 2-beta.
     
 0.944
TIMM17A
Mitochondrial import inner membrane translocase subunit Tim17-A.
    
 0.939
ENSSCAP00000004080
Mitochondrial import inner membrane translocase subunit TIM23.
    
 0.931
SACM1L
Phosphatidylinositide phosphatase SAC1 isoform X1.
    
 0.928
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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