Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001841annotation not available (44 aa)    
Predicted Functional Partners:
ENSSCAP00000002922
annotation not available
   
 0.992
RPL29
Large subunit ribosomal protein L29e.
   
 0.970
RPL19
Large subunit ribosomal protein L19e.
   
 0.970
RPL39
Large subunit ribosomal protein L39e.
   
 0.970
RPL31
Large subunit ribosomal protein L31e.
   
 0.969
RPL11
Large subunit ribosomal protein L11e.
   
 0.969
RPL5
Ribosomal protein L5.
   
 0.969
RPL26L1
Large subunit ribosomal protein L26e.
   
 0.969
RPL4
Large subunit ribosomal protein L4e.
  
 0.968
RPL8
Ribosomal protein L8.
   
 0.968
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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