STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FABP6Fatty acid-binding protein 6, ileal (gastrotropin). (128 aa)    
Predicted Functional Partners:
FABP2
Fatty acid-binding protein 2, intestinal.
   
 
 0.860
NR1H4
Bile acid receptor isoform X2.
   
 0.822
TSHB-2
Thyrotropin subunit beta isoform X2.
   
 0.725
SLC10A1
Solute carrier family 10 (sodium/bile acid cotransporter), member 1.
   
  
 0.682
FABP5
Fatty acid-binding protein 5, epidermal.
   
 
 0.657
NR0B2
Nuclear receptor subfamily 0 group B member 2.
    
 0.648
CYP7A1
Cholesterol 7alpha-monooxygenase.
     
 0.612
PMP2
Myelin P2 protein-like.
   
 
 0.604
APMAP
Adipocyte plasma membrane-associated protein.
      
 0.584
SLC10A2
Solute carrier family 10 (sodium/bile acid cotransporter), member 2.
   
  
 0.579
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.