STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC171Coiled-coil domain containing 171. (1178 aa)    
Predicted Functional Partners:
CUNH12orf45
Uncharacterized protein C12orf45 homolog.
    
  0.543
LMOD1
Leiomodin-1.
      
 0.493
LYPD6B
Ly6/PLAUR domain-containing protein 6B isoform X1.
      
 0.493
AK9
Adenylate kinase 9.
    
   0.490
TCEANC2
Transcription elongation factor A N-terminal and central domain-containing protein 2.
      
 0.470
TYRP1
LOW QUALITY PROTEIN: 5,6-dihydroxyindole-2-carboxylic acid oxidase.
    
 0.462
NKAIN2
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2.
      
 0.441
NUAK1
NUAK family SNF1-like kinase 1.
      
 0.439
PLCB4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1.
     
 0.439
VEGFC
Vascular endothelial growth factor C isoform X1.
     
 0.432
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.