STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108964818C-C chemokine receptor type 5-like. (154 aa)    
Predicted Functional Partners:
LOC103820036
C-C motif chemokine 5-like isoform X1.
   
 0.962
CD4
T-cell surface glycoprotein CD4.
   
 0.915
CXCR4
C-X-C chemokine receptor type 4.
   
0.792
ENSSCAP00000007880
annotation not available
    
 0.791
CXCL12
Stromal cell-derived factor 1 isoform X1.
    
 0.777
CCR7
C-C chemokine receptor type 7.
   
 
0.686
LOC103822936
C-C motif chemokine 19.
   
 0.664
LOC103812980
C-C chemokine receptor type 5-like.
  
0.653
CXCR2
C-X-C chemokine receptor type 2.
   
 
0.629
CCR6
C-C chemokine receptor type 6.
     
0.625
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.