STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFF4AF4/FMR2 family member 4 isoform X1. (1085 aa)    
Predicted Functional Partners:
CCNT1
Cyclin-T1.
   
 0.999
CDK9
Cyclin-dependent kinase 9.
    
 0.998
CCNT2
Cyclin-T2 isoform X5.
   
 0.998
EAF1
ELL-associated factor 1.
    
 0.997
ELL
RNA polymerase II elongation factor ELL.
    
 0.996
EAF2
ELL associated factor 2.
    
 0.994
MLLT3
YEATS domain-containing protein 1/3.
    
 0.990
MLLT1
YEATS domain-containing protein 1/3.
    
 0.990
AFF1
AF4/FMR2 family member 1 isoform X2.
    
0.945
IWS1
Protein IWS1 homolog isoform X1.
     
 0.929
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.