STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103814714Uncharacterized protein LOC103814714. (1015 aa)    
Predicted Functional Partners:
SGO1
Shugoshin-like 1.
  
  
 0.728
PLK1
Polo like kinase 1.
   
 
 0.707
CDC20
Cell division cycle 20, cofactor of APC complex.
   
 
 0.661
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.630
BUB1B
Uncharacterized protein LOC108964006.
   
 
 0.630
RAD21
Double-strand-break repair protein rad21 homolog.
     
 0.629
NUDC
Nuclear migration protein nudC.
     
 0.624
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.619
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 
 0.604
FZR1
Cell division cycle 20-like protein 1, cofactor of APC complex.
   
 
 0.556
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.