STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX11BPeroxisomal membrane protein 11B isoform X1. (286 aa)    
Predicted Functional Partners:
PEX11G
Peroxisomal biogenesis factor 11 gamma.
    
 0.950
PEX11A
Peroxisomal membrane protein 11A isoform X1.
  
  
 
0.905
PEX13
Peroxisome biogenesis factor 13.
   
 0.892
PEX14
Peroxisomal membrane protein PEX14.
    
 0.884
PEX12
Peroxisome assembly protein 12.
   
 0.876
PEX3
Peroxisomal biogenesis factor 3.
   
 0.874
PEX10
Peroxisome biogenesis factor 10.
    
 
 0.753
LOC103815539
Claudin-15-like.
    
 0.742
FAM185A
Protein FAM185A.
    
 0.731
PEX16
Peroxisomal biogenesis factor 16.
   
 
 0.716
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.