STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSIP1PC4 and SFRS1-interacting protein. (573 aa)    
Predicted Functional Partners:
KMT2A
Histone-lysine N-methyltransferase 2A isoform X1.
    
 0.939
ENSSCAP00000022079
annotation not available
   
 
 0.882
UGDH
UDP-glucose 6-dehydrogenase.
      
 0.841
BICC1
Protein bicaudal C homolog 1 isoform X1.
   
  
 0.766
SECISBP2L
Selenocysteine insertion sequence-binding protein 2-like isoform X1.
      
 0.742
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
   0.703
ENSSCAP00000002602
annotation not available
    
   0.672
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.
   
 0.630
DNAJB13
DnaJ homolog subfamily B member 13.
    
 0.629
DNAJB5
DnaJ homolog subfamily B member 5 isoform X2.
    
 0.616
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.