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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L2HGDHL-2-hydroxyglutarate dehydrogenase, mitochondrial. (455 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase, mitochondrial isoform X2.
    
 0.928
GLUD1
Glutamate dehydrogenase 1, mitochondrial isoform X1.
    
 0.909
ALDH4A1
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial.
  
 
 0.849
GLUL
Glutamine synthetase.
  
 
 0.839
LOC103819060
Glutamine synthetase.
  
 
 0.839
GAD2
Glutamate decarboxylase 2.
     
 0.812
GAD1
Glutamate decarboxylase 1.
     
 0.812
GLS
Glutaminase kidney isoform, mitochondrial isoform X1.
     
  0.800
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
   
 
 0.767
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
   
 
 0.716
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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