Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RNF14E3 ubiquitin-protein ligase RNF14. (476 aa)    
Predicted Functional Partners:
AR
Androgen receptor.
    
 
 0.954
ATP5PO
F-type H+-transporting ATPase subunit O.
    
   0.730
CREBRF
CREB3 regulatory factor.
    
 
 0.684
ARHGAP27
LOW QUALITY PROTEIN: rho GTPase-activating protein 27.
    
 
 0.613
RNF126
E3 ubiquitin-protein ligase RNF115/126.
   
 
 0.611
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
     
  0.546
CUEDC1
CUE domain-containing protein 1.
      
 0.529
NDFIP1
NEDD4 family-interacting protein 1 isoform X1.
      
 0.528
NDUFA6
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.
      
 0.528
WSB2
WD repeat and SOCS box-containing protein 2.
    
 
 0.527
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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