STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF14E3 ubiquitin-protein ligase RNF14. (476 aa)    
Predicted Functional Partners:
AR
Androgen receptor.
    
 
 0.715
CREBRF
CREB3 regulatory factor.
    
 
 0.538
ETF1
LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1.
    
 
 0.514
DUS2
TRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1.
    
 
 0.504
NCOA4
Nuclear receptor coactivator 4 isoform X1.
      
 0.485
RNF217
Probable E3 ubiquitin-protein ligase RNF217.
     
 0.435
ARIH1
E3 ubiquitin-protein ligase ARIH1.
     
0.435
ARHGAP27
LOW QUALITY PROTEIN: rho GTPase-activating protein 27.
    
 
 0.405
RNF216
E3 ubiquitin-protein ligase RNF216.
     
 0.403
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.