STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC3SnRNA-activating protein complex subunit 3 isoform X1. (380 aa)    
Predicted Functional Partners:
SNAPC1
SnRNA-activating protein complex subunit 1.
    
 0.999
SNAPC4
SnRNA-activating protein complex subunit 4 isoform X1.
    
 0.998
ENSSCAP00000014058
annotation not available
    
 0.994
GTF2A2
Transcription initiation factor TFIIA small subunit.
   
  0.898
BRF2
Transcription factor IIIB 50 kDa subunit.
    
  0.884
POLR3E
DNA-directed RNA polymerase III subunit RPC5.
    
 0.876
BDP1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.856
PSME3
Proteasome activator complex subunit 3 isoform X1.
    
   0.833
GTF2F2
General transcription factor IIF subunit 2.
    
  0.816
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.813
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.