STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC3SnRNA-activating protein complex subunit 3 isoform X1. (380 aa)    
Predicted Functional Partners:
SNAPC1
SnRNA-activating protein complex subunit 1.
    
 0.999
SNAPC4
SnRNA-activating protein complex subunit 4 isoform X1.
    
 0.996
ENSSCAP00000014058
annotation not available
    
 0.932
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
  0.910
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.843
GTF2A1
Transcription initiation factor TFIIA large subunit.
    
  0.830
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.823
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.823
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.814
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1.
    
 0.804
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.