STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDFIP1NEDD4 family-interacting protein 1 isoform X1. (207 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
      
 0.692
WWP1
NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1.
    
 
 0.653
SLC11A1
Solute carrier family 11 member 1.
   
 
 0.559
ENSSCAP00000002517
annotation not available
    
 
 0.555
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.555
ATP6AP1
V-type H+-transporting ATPase S1 subunit.
   
  
 0.553
NDUFA6
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.
      
 0.543
NEDD4
E3 ubiquitin-protein ligase NEDD4 isoform X1.
    
 
 0.514
NEDD4L
E3 ubiquitin-protein ligase NEDD4-like isoform X9.
    
 
 0.514
ITCH
E3 ubiquitin-protein ligase Itchy homolog.
    
 
 0.443
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.