Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP21LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 21. (216 aa)    
Predicted Functional Partners:
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.976
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1.
   
 0.746
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
   
 0.730
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.723
LOC103827200
Homeobox protein NANOG-like.
    
 
 0.679
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.662
UBB
Ubiquitin B.
   
 0.657
UBC
Polyubiquitin-C.
   
 0.657
STAM2
LOW QUALITY PROTEIN: signal transducing adapter molecule 2.
    
 0.626
STAM
Signal transducing adapter molecule 1.
    
 0.626
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.