Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TTC39BTetratricopeptide repeat protein 39B isoform X1. (554 aa)    
Predicted Functional Partners:
GNG5
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
      
 0.619
CCDC92
Coiled-coil domain-containing protein 92.
      
 0.566
VAPB
VAMP associated protein B and C.
    
   0.552
CYP2J19
Cytochrome P450 family 2 subfamily J.
   
  
 0.531
CMTR1
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1.
      
 0.471
NXN
Nucleoredoxin.
      
 0.470
PNPLA2
Patatin-like phospholipase domain-containing protein 2.
      
 0.463
SART3
Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1.
      
 0.432
RETSAT
All-trans-retinol 13,14-reductase.
      
 0.405
GRIA4
Glutamate receptor 4 isoform X1.
      
 0.400
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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