STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D10ATBC1 domain family member 10A. (320 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35.
   
 0.854
EIF3A
Eukaryotic translation initiation factor 3 subunit A isoform X1.
    
   0.742
ARF6
ADP-ribosylation factor 6.
   
 
 0.702
TBC1D22B
TBC1 domain family member 22B.
      
 0.684
TBC1D13
TBC1 domain family member 13 isoform X1.
      
 0.683
IFT27
Intraflagellar transport protein 27 homolog isoform X1.
   
 0.666
TBC1D19
TBC1 domain family member 19.
      
 0.612
SYTL2
Synaptotagmin-like protein 2 isoform X5.
     
  0.602
LOC103816379
Synaptotagmin-like protein 2 isoform X1.
     
  0.602
EZR
Ezrin isoform X1.
    
 
 0.600
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.