STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D10ATBC1 domain family member 10A. (320 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35.
   
 0.854
IFT27
Intraflagellar transport protein 27 homolog isoform X1.
   
 0.773
ARF6
ADP-ribosylation factor 6.
   
 
 0.734
ARL15
ADP-ribosylation factor-like protein 15 isoform X2.
   
 
 0.643
TBC1D13
TBC1 domain family member 13 isoform X1.
      
 0.616
TBC1D22B
TBC1 domain family member 22B.
      
 0.534
TBC1D5
TBC1 domain family member 5 isoform X1.
      
 0.511
SYTL4
Synaptotagmin-like protein 4.
     
 0.508
TBC1D19
TBC1 domain family member 19.
      
 0.470
FLCN
Folliculin.
      
 0.463
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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