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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBF1SET binding factor 1. (1714 aa)    
Predicted Functional Partners:
MTMR2
Myotubularin-related protein 2 isoform X2.
   
0.676
MTMR1
Myotubularin-related protein 1/2.
   
0.676
MTM1
Myotubularin isoform X1.
   
0.648
RAB21
Ras-related protein Rab-21.
    
 0.622
TCF20
Transcription factor 20 isoform X1.
   
 0.564
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
      
 0.540
MTMR3
Myotubularin-related protein 3 isoform X1.
   
0.534
MTMR4
Myotubularin-related protein 3/4.
   
0.534
KMT2A
Histone-lysine N-methyltransferase 2A isoform X1.
   
 0.509
CHM
Rab proteins geranylgeranyltransferase component A 1.
     
 0.488
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.