STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001964Alpha-aspartyl dipeptidase-like. (300 aa)    
Predicted Functional Partners:
DUSP28
Atypical dual specificity phosphatase.
      
 0.689
METTL22
Methyltransferase-like protein 22 isoform X1.
      
 0.529
TLCD4
TLC domain-containing protein 4-B.
      
 0.528
WDR33
Pre-mRNA 3' end processing protein WDR33 isoform X1.
      
 0.520
ENSSCAP00000002375
Neurotrypsin isoform X1.
      
 0.472
NFS1
Cysteine desulfurase, mitochondrial.
      
 0.472
COX16
Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial isoform X1.
      
 0.471
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
      
 0.469
ZC3H15
Zinc finger CCCH domain-containing protein 15.
      
 0.442
ENSSCAP00000005049
annotation not available
      
 0.442
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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