STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000001987annotation not available (59 aa)    
Predicted Functional Partners:
LOC103813813
Cytochrome c oxidase subunit 6C-2.
   
 0.994
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.990
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.989
COX4I1
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.979
ENSSCAP00000011652
annotation not available
   
 0.972
COX7A2
Cytochrome c oxidase subunit 7A2, mitochondrial.
   
 0.967
UQCRB
Cytochrome b-c1 complex subunit 7 isoform X1.
   
 0.965
LOC103816343
Cytochrome c oxidase subunit 7B, mitochondrial.
   
 0.965
UQCRQ
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.961
ENSSCAP00000011232
annotation not available
   
 0.961
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.