STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFL1E3 UFM1-protein ligase 1. (788 aa)    
Predicted Functional Partners:
DDRGK1
DDRGK domain containing 1.
    
 
 0.926
UBA5
Ubiquitin-like modifier-activating enzyme 5.
   
 
 0.846
UFM1
Ubiquitin-fold modifier 1.
   
 
 0.754
UFSP2
Ufm1-specific protease 2.
   
  
 0.697
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
     
 0.613
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X2.
   
 
 0.605
PAWR
Pro-apoptotic WT1 regulator.
      
 0.537
SUGT1
Suppressor of G2 allele of SKP1.
      
 0.520
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
     
 0.461
TRIP4
Activating signal cointegrator 1.
      
 0.450
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.