Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTMR3Myotubularin-related protein 3 isoform X1. (1204 aa)    
Predicted Functional Partners:
MTMR4
Myotubularin-related protein 3/4.
  
 
0.984
SACM1L
Phosphatidylinositide phosphatase SAC1 isoform X1.
   
 
 0.932
PIP4K2B
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.
    
 0.921
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.
    
 0.921
PIKFYVE
1-phosphatidylinositol 3-phosphate 5-kinase isoform X2.
     
0.915
PIP4P2
Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform X1.
     
 0.915
FIG4
Phosphatidylinositol 3,5-bisphosphate 5-phosphatase.
     
 0.914
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.909
INPP4B
Inositol polyphosphate 4-phosphatase type II.
     
 0.906
INPP5F
Phosphatidylinositide phosphatase SAC2.
     
 0.905
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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