STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE4Copine-4 isoform X2. (570 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B isoform X1.
   
 
 0.487
TOP1
DNA topoisomerase I.
    
 
 0.449
ROCK1
Rho-associated protein kinase 1.
     
 0.444
CPNE1
Copine 1.
     
  0.430
GLRX5
Glutaredoxin 5.
     
 0.416
PPP1R8
Nuclear inhibitor of protein phosphatase 1.
      
 0.408
ACBD5
Acyl-CoA-binding domain-containing protein 5 isoform X1.
      
 0.400
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.