STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002005annotation not available (177 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin.
   
 0.843
RPA2
Replication protein A 32 kDa subunit.
   
 0.766
ENSSCAP00000020530
annotation not available
    
 0.634
LOC103824727
Class I histocompatibility antigen, F10 alpha chain-like.
  
 
0.626
PDIA3
Protein disulfide-isomerase A3.
    
 0.573
PDIA4
Protein disulfide-isomerase A4.
    
  0.506
ABCB9
ATP-binding cassette, subfamily B (MDR/TAP), member 9.
   
 0.499
HSPA5
Endoplasmic reticulum chaperone BiP.
    
  0.490
SASS6
Spindle assembly abnormal protein 6 homolog.
   
 0.484
STN1
CST complex subunit STN1 isoform X1.
   
 0.484
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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