STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002005annotation not available (177 aa)    
Predicted Functional Partners:
ENSSCAP00000020530
annotation not available
    
 0.744
RPA2
Replication protein A 32 kDa subunit.
   
 0.701
B2M
Beta-2-microglobulin.
   
 0.701
SASS6
Spindle assembly abnormal protein 6 homolog.
   
 0.611
STN1
CST complex subunit STN1 isoform X1.
   
 0.611
ENSSCAP00000002133
ENHANCER OF AG-4 protein 2-like.
    
 0.514
ENSSCAP00000017566
annotation not available
  
 
  0.496
PDIA3
Protein disulfide-isomerase A3.
    
 0.484
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
    
 0.473
CD247
T-cell surface glycoprotein CD3 zeta chain isoform X1.
    
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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