STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS12Neurotrypsin. (697 aa)    
Predicted Functional Partners:
SCN4B
Voltage-gated sodium channel type IV beta.
      
 0.682
SPINK9
Serine protease inhibitor Kazal-type 6/7/9.
    
 0.601
CRBN
Protein cereblon isoform X1.
      
 0.599
MGAT5
Alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetyl-glucosaminyltransferase.
    
 0.582
APIP
Methylthioribulose-1-phosphate dehydratase.
      
 0.533
CC2D1B
Coiled-coil and C2 domain-containing protein 1B.
      
 0.529
CHRNB3
Neuronal acetylcholine receptor subunit beta-3.
     
 0.529
MMP9
Matrix metalloproteinase-9 (gelatinase B).
     
 0.496
ZBTB11
Zinc finger and BTB domain-containing protein 11.
    
 
 0.482
SERPINI1
Neuroserpin.
    
 0.457
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.