STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002012LOW QUALITY PROTEIN: peroxisomal coenzyme A diphosphatase NUDT7-like. (160 aa)    
Predicted Functional Partners:
ENSSCAP00000014983
Peroxisomal coenzyme A diphosphatase NUDT7-like.
  
  
 
0.901
DCP1A
MRNA-decapping enzyme 1A isoform X2.
    
 0.666
DCP1B
MRNA-decapping enzyme 1B isoform X1.
    
 0.666
PEX12
Peroxisome assembly protein 12.
   
 
 0.651
EDC4
Enhancer of mRNA-decapping protein 4.
    
 0.643
XRN1
5'-3' exoribonuclease 1 isoform X1.
   
 0.631
PATL1
DNA topoisomerase 2-associated protein PAT1.
    
 0.622
PATL2
DNA topoisomerase 2-associated protein PAT1.
    
 0.622
PEX14
Peroxisomal membrane protein PEX14.
     
 0.614
PEX13
Peroxisome biogenesis factor 13.
     
 0.612
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.