STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNA1ECalcium voltage-gated channel subunit alpha1 E. (2219 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.986
ENSSCAP00000002703
annotation not available
   
 0.848
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.832
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
   
0.778
SCN3B
Voltage-gated sodium channel type III beta.
   
 0.776
RYR2
Ryanodine receptor 2.
   
 0.769
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4 isoform X2.
   
 0.762
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
  
 
0.729
CACNA1C
Voltage-dependent L-type calcium channel subunit alpha-1C isoform X1.
  
 
0.727
CAV3
Caveolin 3.
    
 0.704
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.