Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
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[Homology]
Score
LACTB2Endoribonuclease LACTB2 isoform X1. (287 aa)    
Predicted Functional Partners:
YBEY
ybeY metalloendoribonuclease.
  
 
 0.813
PLA2G12B
Group XIIB secretory phospholipase A2-like protein.
      
 0.696
SLC16A9
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 9.
      
 0.670
ADGRD1
LOW QUALITY PROTEIN: adhesion G-protein coupled receptor D1.
      
 0.612
RPS23
Small subunit ribosomal protein S23e.
      
 0.594
NOA1
Nitric oxide-associated protein 1.
      
 0.585
LSS
Lanosterol synthase.
    
 
 0.578
ENSSCAP00000000186
annotation not available
      
 0.570
RNASEH1
Ribonuclease H1.
     
 0.559
ENSSCAP00000009061
Betaine--homocysteine S-methyltransferase 1.
  
  
 0.542
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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