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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LACTB2Endoribonuclease LACTB2 isoform X1. (287 aa)    
Predicted Functional Partners:
YBEY
ybeY metalloendoribonuclease.
  
 
 0.753
SUOX
Sulfite oxidase.
   
  
 0.700
ENSSCAP00000000186
annotation not available
      
 0.538
TSTD3
Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3.
  
 
 0.519
LSS
Lanosterol synthase.
    
 
 0.499
GLOD4
Glyoxalase domain-containing protein 4.
  
 
 0.499
RNASEH1
Ribonuclease H1.
     
 0.498
MCEE
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
  
 
 0.451
GLO1
Lactoylglutathione lyase.
  
 
 0.423
MARS1
methionyl-tRNA synthetase 1.
   
 0.422
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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