STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDV3Protein CDV3 homolog isoform X1. (147 aa)    
Predicted Functional Partners:
RMDN1
Regulator of microtubule dynamics protein 1 isoform X1.
      
 0.614
TXLNG
Gamma-taxilin.
    
 
 0.605
TBCD
LOW QUALITY PROTEIN: tubulin-specific chaperone D.
      
 0.573
TMEM108
Transmembrane protein 108 isoform X3.
      
 0.571
SERF1A
Small EDRK-rich factor 1.
      
 0.567
PA2G4
Proliferation-associated protein 2G4.
   
  
 0.536
ZFAND6
AN1-type zinc finger protein 6 isoform X1.
    
   0.516
RPS23
Small subunit ribosomal protein S23e.
      
 0.505
QKI
QKI, KH domain containing RNA binding.
    
   0.463
ZPR1
Zinc finger protein ZPR1 isoform X3.
   
  
 0.457
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.