Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RREB1Ras-responsive element-binding protein 1 isoform X1. (1690 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.860
CTBP2
C-terminal-binding protein 2 isoform X1.
    
 
 0.819
CTBP1
C-terminal-binding protein 1 isoform X2.
    
 
 0.819
HOOK1
Protein Hook homolog 1.
    
 0.800
NFE2L2
Nuclear factor erythroid 2-related factor 2 isoform X1.
      
 0.737
NFIA
Nuclear factor 1 A-type isoform X1.
    
 
 0.723
CHD1
Chromodomain-helicase-DNA-binding protein 1 isoform X1.
   
 0.700
RCOR1
REST corepressor 1.
    
 0.671
ENSSCAP00000002365
C-terminal-binding protein 2.
    
 
 0.650
PGR
LOW QUALITY PROTEIN: progesterone receptor.
    
 0.625
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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