STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCR1Chemokine XC receptor 1. (334 aa)    
Predicted Functional Partners:
LOC103827070
C motif chemokine 1.
   
 
 0.965
BATF3
Basic leucine zipper transcriptional factor ATF-like 3.
      
 0.683
CD4
T-cell surface glycoprotein CD4.
   
 
 0.528
FLT3
Fms related tyrosine kinase 3.
    
 
 0.517
LY75
Lymphocyte antigen 75.
     
 0.457
CD86
T-lymphocyte activation antigen CD86.
   
  
 0.450
ZBTB46
Zinc finger and BTB domain-containing protein 46 isoform X1.
    
 0.446
SLC6A20
Solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20.
      
 0.443
FYCO1
FYVE and coiled-coil domain-containing protein 1 isoform X2.
      
 0.439
CLDN23
Claudin-23.
      
 0.438
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.