STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FYCO1FYVE and coiled-coil domain-containing protein 1 isoform X2. (1545 aa)    
Predicted Functional Partners:
KLC4
Kinesin light chain 4 isoform X1.
    
 0.918
RAB7A
Ras-related protein Rab-7A.
    
 0.914
KLC1
Kinesin light chain 1 isoform X1.
    
 0.913
KIF5C
Kinesin family member 5.
    
 0.912
KIF5B
Kinesin family member 5.
    
 0.912
RAB7B
Ras-related protein Rab-7B.
     
 0.901
SASS6
Spindle assembly abnormal protein 6 homolog.
    
 
 0.867
STARD3NL
STARD3 N-terminal-like protein isoform X1.
      
 0.682
LZTFL1
Leucine zipper transcription factor-like protein 1.
    
 
 0.655
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 
 0.641
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.