STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002158Long/medium wavelength-sensitive opsin. (69 aa)    
Predicted Functional Partners:
RGR
RPE-retinal G protein-coupled receptor isoform X1.
   
 
 0.597
GNB5
Guanine nucleotide-binding protein subunit beta-5.
    
 0.588
GNG10
G protein subunit gamma 10.
    
 0.588
GNG5
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
    
 0.587
GNG13
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
   
  0.566
GNG11
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.
   
 0.564
GNG12
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12.
    
 0.532
GNG7
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7.
    
 0.508
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
 0.506
GNB4
Guanine nucleotide-binding protein subunit beta-4.
    
 0.485
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.