STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP1Protein NipSnap homolog 1. (272 aa)    
Predicted Functional Partners:
ENSSCAP00000004114
annotation not available
 
      0.896
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.674
SQSTM1
Sequestosome-1 isoform X1.
    
 
 0.586
NBR1
Next to BRCA1 gene 1 protein isoform X1.
    
 
 0.539
RHOH
Rho-related GTP-binding protein RhoH isoform X1.
   
 
  0.530
NUDCD1
NudC domain-containing protein 1.
   
   0.492
OSBPL10
Oxysterol-binding protein-related protein 9/10/11.
   
  0.481
OSBPL11
LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 11.
   
  0.481
MTR
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.474
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
  
 0.473
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.