STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103812987C-C chemokine receptor type 8-like. (377 aa)    
Predicted Functional Partners:
LOC103813169
C-C chemokine receptor type 8-like.
     
 
0.900
LOC103820036
C-C motif chemokine 5-like isoform X1.
   
 0.862
CD4
T-cell surface glycoprotein CD4.
   
 0.818
ENSSCAP00000007880
annotation not available
  
 
 0.804
CXCL12
Stromal cell-derived factor 1 isoform X1.
    
 0.647
LOC103820034
C-C motif chemokine 4 homolog.
   
 0.636
CXCR4
C-X-C chemokine receptor type 4.
    
 0.634
LOC103822936
C-C motif chemokine 19.
    
 0.541
LOC103823292
Beta-defensin 4.
     
 0.511
CD80
T-lymphocyte activation antigen CD80.
  
 
 0.465
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.