STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARS2LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, mitochondrial. (461 aa)    
Predicted Functional Partners:
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
 0.995
LRRC47
LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 47.
  
 0.993
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.901
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
  
 0.832
DARS2
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.814
RPL11
Large subunit ribosomal protein L11e.
   
  
 0.809
YARS2
LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial.
  
  
 0.807
OLA1
Obg-like ATPase 1 isoform X1.
  
  
 0.800
MRPL13
39S ribosomal protein L13, mitochondrial.
  
  
 0.799
RPS15
Small subunit ribosomal protein S15e.
   
  
 0.788
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.