STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARS2LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, mitochondrial. (461 aa)    
Predicted Functional Partners:
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
 0.996
LRRC47
LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 47.
  
 0.945
PARS2
LOW QUALITY PROTEIN: probable proline--tRNA ligase, mitochondrial.
   
  
 0.892
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.873
LARS2
Probable leucine--tRNA ligase, mitochondrial.
  
  
 0.839
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
    
   0.826
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
  
  
 0.817
YARS2
LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial.
  
  
 0.790
DARS2
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.774
NARS2
asparaginyl-tRNA synthetase 2, mitochondrial.
  
  
 0.770
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.