STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASEL2-5A-dependent ribonuclease. (756 aa)    
Predicted Functional Partners:
ABCE1
ATP-binding cassette, sub-family E, member 1.
   
 0.970
DHX33
ATP-dependent RNA helicase DHX33 isoform X1.
    
 0.943
HSPA5
Endoplasmic reticulum chaperone BiP.
  
 0.918
KDM6A
Lysine-specific demethylase 6A isoform X3.
  
 0.916
POP4
Ribonuclease P protein subunit POP4.
    
  0.880
POP1
Ribonucleases P/MRP protein subunit POP1.
    
  0.870
WDR90
WD repeat-containing protein 90 isoform X3.
    
 0.830
BIRC6
Baculoviral IAP repeat-containing protein 6 (apollon).
   
 0.816
CUL1
Cullin-1 isoform X1.
    
 0.802
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X2.
   
 0.773
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.