STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH10Retinol dehydrogenase 10. (176 aa)    
Predicted Functional Partners:
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 
 0.969
ALDH1A1
Retinal dehydrogenase 1.
  
 0.957
ALDH1A3
LOW QUALITY PROTEIN: aldehyde dehydrogenase family 1 member A3.
  
 0.950
ENSSCAP00000018025
Retinol dehydrogenase 12-like.
   
 
 0.950
DHRS3
Short-chain dehydrogenase/reductase 3.
     
0.939
RPE65
Retinoid isomerohydrolase / lutein isomerase.
   
 
 0.936
BCO1
Beta,beta-carotene 15,15'-dioxygenase isoform X1.
   
 
 0.932
LRAT
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.931
LOC103814889
Retinol dehydrogenase 8-like isoform X2.
     
 0.930
ALDH1A2
Retinal dehydrogenase 2 isoform X1.
  
 0.925
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.