STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM4Protein-glutamine gamma-glutamyltransferase 4. (707 aa)    
Predicted Functional Partners:
F13B
Coagulation factor XIII B polypeptide.
    
 0.721
F2
Coagulation factor II (thrombin).
     
 0.612
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2.
   
  0.492
FGA
Fibrinogen alpha chain.
    
 0.429
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
     
 0.422
SERPIND1
Heparin cofactor II.
     
 0.422
SERPINC1
Antithrombin III.
     
 0.411
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.