Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002602annotation not available (344 aa)    
Predicted Functional Partners:
HDGFL2
HDGF like 2.
   
 
 0.678
PSIP1
PC4 and SFRS1-interacting protein.
    
   0.672
MDK
Midkine.
      
 0.602
PTN
Pleiotrophin.
      
 0.545
EIF2S2
Eukaryotic translation initiation factor 2 subunit 2.
   
   0.513
NAP1L1
Nucleosome assembly protein 1-like 1 isoform X1.
   
 
 0.450
DRG2
Developmentally-regulated GTP-binding protein 2.
    
 
 0.431
XBP1
X box-binding protein 1.
     
  0.425
CDK12
Cyclin-dependent kinase 12/13.
    
 
 0.414
ENSSCAP00000022049
annotation not available
    
 
 0.414
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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