STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD4SMAD family member 4. (511 aa)    
Predicted Functional Partners:
SMAD1
Mothers against decapentaplegic homolog 1.
   
0.985
SKI
Ski oncogene.
   
 0.970
SKIL
Ski-like protein.
   
 0.959
SMAD5
Mothers against decapentaplegic homolog 5.
   
0.950
SMAD9
Mothers against decapentaplegic homolog 9.
   
0.949
USP9X
Probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1.
   
 0.941
SMAD6
Mothers against decapentaplegic homolog 6.
    
0.897
BMP2
Bone morphogenetic protein 2.
    
 0.892
SMAD2
Mothers against decapentaplegic homolog 2 isoform X1.
   
0.883
SMAD3
Mothers against decapentaplegic homolog 3 isoform X1.
   
0.874
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.