STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1AZinc finger C2HC domain-containing protein 1A. (326 aa)    
Predicted Functional Partners:
RUFY3
Protein RUFY3 isoform X3.
      
 0.572
MIOS
WD repeat-containing protein mio.
      
 0.536
METTL25
Methyltransferase like 25.
    
 
 0.525
FAM163B
Family with sequence similarity 163 member B.
      
 0.516
WDR59
GATOR complex protein WDR59 isoform X2.
      
 0.515
ZDHHC22
Palmitoyltransferase ZDHHC22.
      
 0.510
ECHDC3
Enoyl-CoA hydratase domain-containing protein 3, mitochondrial.
      
 0.463
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.