STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRX1Paired mesoderm homeobox protein 1. (207 aa)    
Predicted Functional Partners:
ZNF366
Zinc finger protein 366.
    
 
 0.549
HHEX
Hematopoietically-expressed homeobox protein HHEX.
      
 0.541
GLIS1
Zinc finger protein GLIS1 isoform X1.
    
 
 0.535
GPSM1
G-protein-signaling modulator 1 isoform X2.
      
 0.511
ENSSCAP00000009321
annotation not available
      
 0.511
TWIST2
Twist-related protein 2.
   
  
 0.483
PDGFRA
Platelet-derived growth factor receptor alpha isoform X1.
   
  
 0.476
VGLL3
Transcription cofactor vestigial-like protein 3.
      
 0.473
RTF2
Replication termination factor 2.
      
 0.450
ZNF710
Zinc finger protein 710.
    
 
 0.407
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.